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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123770100_123770697_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123770100 - 123770697

Intron Length:

598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CCCTTTTTATTT

Flanking Amino Acid:

QLDFKKNGTNTILIQNIYRN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

81.6

32.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.1

0.81

0.6

81.7

23.1

Minor 5ss

45.1

-0.5

3.4

41.9

Minor BPS

50.4

0.09

1.6

61.8

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044976

123767972 - 123783939

15968

ENSAPLT00000044026

123767931 - 123779487

11557

ENSAPLT00000029940

123767931 - 123779480

11550

ENSAPLT00000045044

123767931 - 123779480

11550