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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123777276_123779235_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123777276 - 123779235

Intron Length:

1960

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

ACTTTCTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

CTTTCTTTGAAG

Flanking Amino Acid:

RRELYGRRRKKHRSRSRSRE

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

77.7

33.3

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

74.8

0.56

75.6

32.5

Minor 5ss

40.1

-1.1

2.9

49.5

41.1

Minor BPS

63.9

0.29

1.5

67.24

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044026

123767931 - 123779487

11557