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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12379978_12380437_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12379978 - 12380437

Intron Length:

460

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTAATCTGACTT

Flanking Amino Acid:

AHFLEHMAFKGTKKRSQLDL

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.9

30.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.5

0.82

0.9

84.6

Minor 5ss

33.9

-1.8

2.8

41.5

45.1

Minor BPS

49.6

0.05

1.7

70.05

Associated Gene:

Gene:

PMPCB

Ensembl Gene ID:

ENSAPLG00000012048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017822

12378207 - 12385807

7601

ENSAPLT00000012557

12378207 - 12385867

7661