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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123801639_123802489_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123801639 - 123802489

Intron Length:

851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGCCAA

U12 Branch Point Sequence:

AAAGTGGAAACT

Flanking Amino Acid:

KLKEKCPGCKIIGVDPEGSI

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

73.6

37.1

Major BPS

48.1

-0.1

1.3

56.4

40.6

Major PPT

78.2

0.64

0.8

69.6

36.8

Minor 5ss

34.7

-1.7

3.2

43.8

Minor BPS

35.1

-1

2.5

51.2

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009685

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033119

123793868 - 123813461

19594

ENSAPLT00000010120

123793868 - 123811115

17248

ENSAPLT00000010051

123793868 - 123841768

47901