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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123802616_123803256_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123802616 - 123803256

Intron Length:

641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTTGT

5'SS Class:

major

3'SS Sequence:

TGCCCCCTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAA

U12 Branch Point Sequence:

TCTTCCTGCCCC

Flanking Amino Acid:

DFVPTVLDRSTVDQWYKTND

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

72.1

40.1

Major BPS

0.7

0.9

79.6

29.1

Major PPT

70.9

0.47

0.8

61.4

Minor 5ss

44.8

-0.6

2.9

68.2

42.5

Minor BPS

41.2

-0.6

3.6

66.78

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009685

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010120

123793868 - 123811115

17248

ENSAPLT00000010051

123793868 - 123841768

47901

ENSAPLT00000033119

123793868 - 123813461

19594