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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12381235_12381910_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12381235 - 12381910

Intron Length:

676

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGTGCA

5'SS Class:

major

3'SS Sequence:

TGACTGTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

GTTTCCTTGACT

Flanking Amino Acid:

RTILGPTENIKSINRNDLVE

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

70.5

33.4

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

74.8

0.56

65.3

45.3

Minor 5ss

40.8

-1

49.9

40.8

Minor BPS

88.5

1.29

0.9

96.53

28.3

Associated Gene:

Gene:

PMPCB

Ensembl Gene ID:

ENSAPLG00000012048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017822

12378207 - 12385807

7601

ENSAPLT00000012557

12378207 - 12385867

7661