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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12383810_12385166_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12383810 - 12385166

Intron Length:

1357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TAAACTTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

CATTATTTAATG

Flanking Amino Acid:

QDMVHFVQREWMRLCTSVTE

Intron Amino Acid Position:

383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.9

35.2

Major BPS

90.7

1.01

0.7

19.9

Major PPT

77.1

0.61

0.9

73.6

41.1

Minor 5ss

38.8

-1.3

2.9

45.4

43.9

Minor BPS

59.8

0.17

1.6

61.11

41.3

Associated Gene:

Gene:

PMPCB

Ensembl Gene ID:

ENSAPLG00000012048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017822

12378207 - 12385807

7601

ENSAPLT00000012557

12378207 - 12385867

7661