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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12385253_12385328_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12385253 - 12385328

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGAACC

5'SS Class:

major

3'SS Sequence:

TTTCCTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

GTGCTGATAACT

Flanking Amino Acid:

LKTNMLLQLDGSTPICEDIG

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

0.9

70.4

33.4

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

82.2

0.72

0.8

Minor 5ss

29.4

-2.4

2.8

33.3

35.2

Minor BPS

45.9

-0.2

2.2

66.77

43.6

Associated Gene:

Gene:

PMPCB

Ensembl Gene ID:

ENSAPLG00000012048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017822

12378207 - 12385807

7601

ENSAPLT00000012557

12378207 - 12385867

7661