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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12385418_12385648_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12385418 - 12385648

Intron Length:

231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTAACCCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAC

U12 Branch Point Sequence:

CTGTCTCTAACC

Flanking Amino Acid:

PIPELEARIEAIDAQTIREV

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

73.6

37.1

Major BPS

66.7

0.42

1.2

67.6

36.5

Major PPT

74.3

0.55

0.9

69.9

36.2

Minor 5ss

34.7

-1.7

3.2

43.8

Minor BPS

62.2

0.36

1.7

70.56

41.2

Associated Gene:

Gene:

PMPCB

Ensembl Gene ID:

ENSAPLG00000012048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017822

12378207 - 12385807

7601

ENSAPLT00000012557

12378207 - 12385867

7661