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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123859423_123861089_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123859423 - 123861089

Intron Length:

1667

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TGATTGTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TACTTCTTACTT

Flanking Amino Acid:

TNLTLLQVNNWFINARRRIL

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

33.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

67.9

0.4

45.1

Minor 5ss

30.9

-2.2

3.3

36.6

41.5

Minor BPS

63.5

0.5

1.6

76.1

41.2

Associated Gene:

Gene:

PKNOX1

Ensembl Gene ID:

ENSAPLG00000009259

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009662

123857314 - 123890232

32919