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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123861167_123862200_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123861167 - 123862200

Intron Length:

1034

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGACT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCTGTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTCCCT

Flanking Amino Acid:

MRSWLFQHIGHPYPTEDEKK

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

76.1

39.5

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

0.47

0.9

69.5

36.8

Minor 5ss

34.5

-1.8

3.2

41.9

44.5

Minor BPS

45.4

-0.2

3.6

82.56

39.6

Associated Gene:

Gene:

PKNOX1

Ensembl Gene ID:

ENSAPLG00000009259

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009662

123857314 - 123890232

32919