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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12387638_12388545_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

12387638 - 12388545

Intron Length:

908

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATCTTTC

5'SS Class:

weak_minor

3'SS Sequence:

CTGTTCCTAATAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTCTGTTTAATG

Flanking Amino Acid:

INKAKSLQKLDPHQKDDINK

Intron Amino Acid Position:

510

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.2

67.6

38.6

Major BPS

81.8

0.79

1.1

34.5

Major PPT

70.4

0.46

0.9

66.5

34.4

Minor 5ss

72.8

0.77

1.7

75.6

Minor BPS

0.21

1.8

66.31

42.6

Associated Gene:

Gene:

DNAJC2

Ensembl Gene ID:

ENSAPLG00000011979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012528

12386069 - 12401877

15809