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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123880147_123881318_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123880147 - 123881318

Intron Length:

1172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTAATG

5'SS Class:

major

3'SS Sequence:

ACTTTCATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TCTATTTTAACT

Flanking Amino Acid:

PMDADKQAIYRHPLFPLLAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

68.3

42.6

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

75.7

0.58

0.9

67.3

38.4

Minor 5ss

35.8

-1.6

3.3

48.6

47.2

Minor BPS

73.9

0.83

1.2

83.78

37.4

Associated Gene:

Gene:

PKNOX1

Ensembl Gene ID:

ENSAPLG00000009259

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009662

123857314 - 123890232

32919