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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12388647_12389123_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12388647 - 12389123

Intron Length:

477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTCTT

5'SS Class:

major

3'SS Sequence:

ATCCTTGCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

CCCTTTCTATCC

Flanking Amino Acid:

VNLFPAGTNSRWEVIANYMN

Intron Amino Acid Position:

476

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

74.8

41.3

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

76.4

0.59

0.9

73.3

36.5

Minor 5ss

39.2

-1.2

3.3

59.3

45.1

Minor BPS

-0.4

1.8

49.26

41.9

Associated Gene:

Gene:

DNAJC2

Ensembl Gene ID:

ENSAPLG00000011979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012528

12386069 - 12401877

15809