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Intron Name: Anas_platyrhynchos_platyrhynchos_1_123963575_123964185_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

123963575 - 123964185

Intron Length:

611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTGTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

ACTACATTAACA

Flanking Amino Acid:

YSMISLCSLQEKFSQIDILI

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

81.4

30.7

Major BPS

0.52

1.1

77.7

35.3

Major PPT

85.8

0.81

0.8

80.8

36.4

Minor 5ss

43.3

-0.7

3.1

60.6

44.5

Minor BPS

64.6

0.45

1.7

72.08

39.4

Associated Gene:

Gene:

PDE9A

Ensembl Gene ID:

ENSAPLG00000007348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007672

123958034 - 123998594

40561