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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12396780_12399329_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12396780 - 12399329

Intron Length:

2550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TAACTTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTCTGGTAACT

Flanking Amino Acid:

DNDYFTCITKAYEILSDPVK

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.1

0.72

0.9

76.2

37.2

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

46.6

-0.1

2.6

73.56

43.3

Associated Gene:

Gene:

DNAJC2

Ensembl Gene ID:

ENSAPLG00000011979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012528

12386069 - 12401877

15809