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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12401115_12401622_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12401115 - 12401622

Intron Length:

508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTCTGT

5'SS Class:

weak_major

3'SS Sequence:

TTTTTTTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

CAATGTTTATTA

Flanking Amino Acid:

LKTLDPKDWKNQDHYAVLGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

64.2

42.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

92.5

0.96

0.6

92.6

17.3

Minor 5ss

56.1

0.21

2.4

74.2

42.1

Minor BPS

45.8

-0.3

1.9

52.54

40.3

Associated Gene:

Gene:

DNAJC2

Ensembl Gene ID:

ENSAPLG00000011979

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012528

12386069 - 12401877

15809