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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124018034_124018974_R


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
124018034 - 124018974

Intron Length:
941

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTGAGTTTG

5'SS Class:
strong_major

3'SS Sequence:
TTTGTCTCTTTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTAAG

U12 Branch Point Sequence:
TGGTTCTAAGCA

Flanking Amino Acid:
LITTAVSADLGTHKSLKGNA

Intron Amino Acid Position:
448

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.6
0.82
0.9
76.6
34.9

Major BPS
70.6
0.51
1.5
77.9
34.9

Major PPT
83.5
0.75
0.7
82.1
30

Minor 5ss
38.5
-1.3
2.9
46.1
43.6

Minor BPS
49.8
-0
1.9
63.37
43.2

Associated Gene:

Gene:
SLC37A1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

124012491 - 124046969
34479

124012491 - 124046969
34479

124014284 - 124046969
32686

124014284 - 124046969
32686

124014284 - 124046969
32686