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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124058063_124060320_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124058063 - 124060320

Intron Length:

2258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATGAA

5'SS Class:

strong_major

3'SS Sequence:

AGTTGTCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

AGATCCTGGATT

Flanking Amino Acid:

QQGEYIQSAEDKGEEEEEEE

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

27.6

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

74.2

0.54

0.9

70.7

40.5

Minor 5ss

31.4

-2.1

3.2

39.9

46.1

Minor BPS

0.4

1.5

71.86

38.7

Associated Gene:

Gene:

RSPH1

Ensembl Gene ID:

ENSAPLG00000007969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034072

124055329 - 124061168

5840

ENSAPLT00000008276

124055329 - 124062797

7469