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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124060547_124060950_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124060547 - 124060950

Intron Length:

404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTTCT

5'SS Class:

major

3'SS Sequence:

TTTCATATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTATTTTTAATT

Flanking Amino Acid:

EGEETMPANAVTDETADGRD

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

75.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.6

0.78

0.8

81.9

Minor 5ss

45.3

-0.5

2.4

60.2

44.2

Minor BPS

73.2

0.81

1.1

80.88

34.9

Associated Gene:

Gene:

RSPH1

Ensembl Gene ID:

ENSAPLG00000007969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034072

124055329 - 124061168

5840

ENSAPLT00000032686

124055329 - 124062797

7469

ENSAPLT00000008276

124055329 - 124062797

7469