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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124074060_124074559_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124074060 - 124074559

Intron Length:

500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTGGTGTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAC

U12 Branch Point Sequence:

CTTTGCTTACTG

Flanking Amino Acid:

KQIVTACPNKGVILIVGHGS

Intron Amino Acid Position:

546

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

79.3

34.3

Major BPS

66.4

0.41

1.1

57.4

41.4

Major PPT

63.7

0.31

1.1

54.9

48.7

Minor 5ss

34.5

-1.8

3.9

49.2

Minor BPS

51.5

-0

2.1

62.41

46.2

Associated Gene:

Gene:

UBASH3A

Ensembl Gene ID:

ENSAPLG00000008138

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008476

124072912 - 124093198

20287