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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124079077_124080438_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124079077 - 124080438

Intron Length:

1362

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

CACCTCGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

TCCCTCATACCA

Flanking Amino Acid:

SWLQQCLTADGKYYRADLNF

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

75.8

35.2

Major BPS

0.5

1.1

71.2

35.2

Major PPT

72.6

0.51

0.9

68.6

36.9

Minor 5ss

29.8

-2.3

2.6

30.2

36.8

Minor BPS

46.4

-0.2

1.9

56.78

42.7

Associated Gene:

Gene:

UBASH3A

Ensembl Gene ID:

ENSAPLG00000008138

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008476

124072912 - 124093198

20287