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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124084740_124086114_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124084740 - 124086114

Intron Length:

1375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATCA

5'SS Class:

strong_major

3'SS Sequence:

GCTTTATTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

ATTGCTTTATTC

Flanking Amino Acid:

AFSSEASALADCHVKPCLKQ

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.4

35.1

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

73.7

0.53

0.9

39.9

Minor 5ss

36.8

-1.5

3.3

48.1

47.6

Minor BPS

58.1

0.23

1.7

38.4

Associated Gene:

Gene:

UBASH3A

Ensembl Gene ID:

ENSAPLG00000008138

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008476

124072912 - 124093198

20287