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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124086314_124088204_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124086314 - 124088204

Intron Length:

1891

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGCAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAAGGAT

U12 Branch Point Sequence:

GGTGGGTGAAGG

Flanking Amino Acid:

PHITLCDFFTCEDQKVELLY

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

69.9

42.1

Major BPS

43.7

-0.3

1.5

37.4

42.1

Major PPT

90.7

0.92

0.7

88.9

28.1

Minor 5ss

32.9

-2

3.4

48.3

47.3

Minor BPS

33.7

-1.3

2.4

37.22

44.8

Associated Gene:

Gene:

UBASH3A

Ensembl Gene ID:

ENSAPLG00000008138

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008476

124072912 - 124093198

20287