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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124088392_124090055_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124088392 - 124090055

Intron Length:

1664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTAATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGCTTTTAATT

Flanking Amino Acid:

GQKTIEEAAKWLHSHCNDPS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.9

40.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.9

0.79

0.8

82.3

32.9

Minor 5ss

37.7

-1.4

3.3

48.2

42.1

Minor BPS

66.1

0.58

1.2

74.92

36.3

Associated Gene:

Gene:

UBASH3A

Ensembl Gene ID:

ENSAPLG00000008138

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008476

124072912 - 124093198

20287