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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12410006_12410152_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12410006 - 12410152

Intron Length:

147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTATGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

AGGTTGTTAACT

Flanking Amino Acid:

KIDPTVTMMQVEEKPDVTYS

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

0.9

83.4

27.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

85.5

0.8

0.9

81.4

35.3

Minor 5ss

35.7

-1.6

3.2

49.9

40.5

Minor BPS

57.9

0.33

2.1

74.51

42.4

Associated Gene:

Gene:

PSMC2

Ensembl Gene ID:

ENSAPLG00000011918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012451

12403316 - 12413116

9801