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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12412229_12412773_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12412229 - 12412773

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGAATG

5'SS Class:

major

3'SS Sequence:

CACTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

GCACCATGAACA

Flanking Amino Acid:

KIEFSLPDLEGRTHIFKIHA

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.3

75.5

40.6

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

82.6

0.73

0.8

31.5

Minor 5ss

32.5

-2

2.9

40.4

45.3

Minor BPS

48.6

-0.1

1.7

57.35

40.9

Associated Gene:

Gene:

PSMC2

Ensembl Gene ID:

ENSAPLG00000011918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012451

12403316 - 12413116

9801