Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_124150608_124152208_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124150608 - 124152208

Intron Length:

1601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGCTA

5'SS Class:

major

3'SS Sequence:

TTCTTCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

TTTCGCTTTATA

Flanking Amino Acid:

LQWMSYISYVRYGFEGVILS

Intron Amino Acid Position:

591

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.1

62.6

43.3

Major BPS

77.9

0.69

78.3

31.3

Major PPT

91.3

0.93

0.6

84.4

30.6

Minor 5ss

33.3

-1.9

3.6

47.7

47.8

Minor BPS

54.6

0.14

2.1

72.73

39.1

Associated Gene:

Gene:

ABCG1

Ensembl Gene ID:

ENSAPLG00000008841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009239

124150379 - 124199566

49188