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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124157367_124157550_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
124157367 - 124157550

Intron Length:
184

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTATTGTGT

5'SS Class:
major

3'SS Sequence:
TGTGTTTCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AGTTTAT

U12 Branch Point Sequence:
AGAAGTTTATTC

Flanking Amino Acid:
PFLWHRPSEEDSSSTEGCHS

Intron Amino Acid Position:
375

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.8
0.51
1.1
65
41.4

Major BPS
72.5
0.56
1.1
63.4
44

Major PPT
78.4
0.64
0.9
73.2
37.2

Minor 5ss
44.6
-0.6
3.1
65.1
46.2

Minor BPS
42.7
-0.5
1.9
46.81
36.3

Associated Gene:

Gene:
ABCG1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

124150379 - 124199566
49188