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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124157700_124158405_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
124157700 - 124158405

Intron Length:
706

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAAGGAAA

5'SS Class:
strong_major

3'SS Sequence:
TTGATTTGTGTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTGAT

U12 Branch Point Sequence:
AAACCAGTAACT

Flanking Amino Acid:
CPTYHNPADFVMEVASGEYG

Intron Amino Acid Position:
325

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.7
0.79
0.9
76.6
33.6

Major BPS
81.2
0.78
1.1
71.4
45.1

Major PPT
73.2
0.52
1
69.6
41.4

Minor 5ss
31.7
-2.1
3.1
36.4
42

Minor BPS
47.5
-0.1
2.2
67.86
41.9

Associated Gene:

Gene:
ABCG1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

124150379 - 124199566
49188