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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12417799_12418346_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12417799 - 12418346

Intron Length:

548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTAATT

Flanking Amino Acid:

SVHVCIASCSGPVMNELTRL

Intron Amino Acid Position:

685

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

71.4

36.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.1

0.74

0.8

78.3

34.8

Minor 5ss

34.6

-1.8

2.8

40.9

45.4

Minor BPS

74.3

0.84

1.2

86.64

33.8

Associated Gene:

Gene:

SLC26A5

Ensembl Gene ID:

ENSAPLG00000011708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012326

12417656 - 12449340

31685