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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12420650_12422119_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12420650 - 12422119

Intron Length:

1470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTAAC

U12 Branch Point Sequence:

CAATACCTAACT

Flanking Amino Acid:

IYCDVEEYEEVKECPGIKIF

Intron Amino Acid Position:

535

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.9

41.1

Major BPS

63.2

0.33

63.6

30.5

Major PPT

88.3

0.86

0.6

89.2

19.7

Minor 5ss

32.6

-2

3.7

46.1

49.1

Minor BPS

54.6

0.22

1.9

72.32

43.6

Associated Gene:

Gene:

SLC26A5

Ensembl Gene ID:

ENSAPLG00000011708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012326

12417656 - 12449340

31685