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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124270436_124272186_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

124270436 - 124272186

Intron Length:

1751

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAACACC

5'SS Class:

weak_major

3'SS Sequence:

TCTGGGATGGGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

TCTGATTCAAAC

Flanking Amino Acid:

QRDACKNWTQIGYIILIAVA

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.6

0.25

1.1

56.8

40.9

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

45.4

-0.2

1.8

46.7

44.8

Minor 5ss

41.3

-1

2.9

49.5

40.7

Minor BPS

45.8

-0.3

1.9

56.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002409

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002417

124270287 - 124279768

9482