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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124365424_124366796_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124365424 - 124366796

Intron Length:

1373

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TGTCAGCTAATA

Flanking Amino Acid:

ALRHEAAARADSQLLTFEED

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

0.75

78.6

Major PPT

84.3

0.77

0.6

84.4

23.5

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

-0.5

2.3

59.63

39.8

Associated Gene:

Gene:

C2CD2

Ensembl Gene ID:

ENSAPLG00000001983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047455

124364659 - 124396339

31681

ENSAPLT00000002063

124364659 - 124400033

35375