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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124366896_124375618_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124366896 - 124375618

Intron Length:

8723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACTTC

5'SS Class:

strong_major

3'SS Sequence:

TTAATTTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CCCCCTTTAATT

Flanking Amino Acid:

VSVVKSAQEKVVSCNVVGDS

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.6

35.3

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

79.5

0.66

0.8

78.2

Minor 5ss

47.8

-0.2

2.9

67.4

Minor BPS

0.49

1.3

68.31

43.6

Associated Gene:

Gene:

C2CD2

Ensembl Gene ID:

ENSAPLG00000001983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047455

124364659 - 124396339

31681

ENSAPLT00000002063

124364659 - 124400033

35375