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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124387581_124389659_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124387581 - 124389659

Intron Length:

2079

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTATTTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTAAAT

Flanking Amino Acid:

LQIVEDGKLDSSLSSKATVP

Intron Amino Acid Position:

358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

86.4

28.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.5

0.78

0.8

36.2

Minor 5ss

43.5

-0.7

2.9

62.1

37.1

Minor BPS

79.5

1.2

92.62

Associated Gene:

Gene:

C2CD2

Ensembl Gene ID:

ENSAPLG00000001983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047455

124364659 - 124396339

31681

ENSAPLT00000002063

124364659 - 124400033

35375