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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124389800_124390084_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124389800 - 124390084

Intron Length:

285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGCCC

5'SS Class:

major

3'SS Sequence:

TTTCTCTTCCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

CTAAGGTGAAAT

Flanking Amino Acid:

GPRLGSISAEFFFIEPNELK

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.69

63.1

41.4

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

83.2

0.75

0.7

77.2

31.5

Minor 5ss

38.1

-1.3

3.2

51.2

45.5

Minor BPS

38.5

-0.7

2.4

55.72

45.7

Associated Gene:

Gene:

C2CD2

Ensembl Gene ID:

ENSAPLG00000001983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047455

124364659 - 124396339

31681

ENSAPLT00000002063

124364659 - 124400033

35375