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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124393340_124394229_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124393340 - 124394229

Intron Length:

890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGCAG

5'SS Class:

major

3'SS Sequence:

TTTCACTGGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTTCTTTCACT

Flanking Amino Acid:

STIIISGVSKTSLSQDSEAA

Intron Amino Acid Position:

543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.42

1.1

53.8

44.9

Major BPS

88.7

0.96

0.8

36.5

Major PPT

68.6

0.42

1.1

65.5

40.7

Minor 5ss

28.1

-2.5

3.5

37.1

47.5

Minor BPS

78.7

0.98

1.6

95.57

31.2

Associated Gene:

Gene:

C2CD2

Ensembl Gene ID:

ENSAPLG00000001983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047455

124364659 - 124396339

31681

ENSAPLT00000002063

124364659 - 124400033

35375