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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124417491_124421421_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

124417491 - 124421421

Intron Length:

3931

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGGGGGCC

5'SS Class:

weak_major

3'SS Sequence:

GAAAGCAGCGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

ATTTAGTGAACG

Flanking Amino Acid:

KQVSSIANGMSAEAESSQWM

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.07

1.2

50.2

34.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

39.6

-0.6

1.6

28.6

36.2

Minor 5ss

25.6

-2.8

3.6

32.9

42.5

Minor BPS

48.2

-0.2

2.3

64.02

43.3

Associated Gene:

Gene:

PRDM15

Ensembl Gene ID:

ENSAPLG00000001239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001518

124410404 - 124440355

29952