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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124549529_124556733_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

124549529 - 124556733

Intron Length:

7205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

TTAACGTTAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

67.1

44.6

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

0.72

0.7

79.9

25.4

Minor 5ss

35.7

-1.6

3.3

46.8

48.5

Minor BPS

56.8

0.29

2.2

79.3

42.1

Associated Gene:

Gene:

TMPRSS2

Ensembl Gene ID:

ENSAPLG00000016160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038937

124549062 - 124569787

20726

ENSAPLT00000027642

124549062 - 124569624

20563