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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124556893_124558087_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

124556893 - 124558087

Intron Length:

1195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTAGG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TTTTTTTTTATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

45.2

Major BPS

84.6

0.86

41.2

Major PPT

94.7

1.01

0.5

91.9

19.2

Minor 5ss

-1.3

2.8

52.4

44.2

Minor BPS

66.5

0.51

1.5

77.98

32.4

Associated Gene:

Gene:

TMPRSS2

Ensembl Gene ID:

ENSAPLG00000016160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016878

124551721 - 124569624

17904

ENSAPLT00000038937

124549062 - 124569787

20726

ENSAPLT00000027642

124549062 - 124569624

20563