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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124563387_124564080_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124563387 - 124564080

Intron Length:

694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTTAA

5'SS Class:

major

3'SS Sequence:

ATTTCTATTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

STDLYKRLYTSNVCTSGKVV

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

72.9

34.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.1

0.77

0.8

78.4

Minor 5ss

54.1

0.14

2.1

66.7

44.7

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

TMPRSS2

Ensembl Gene ID:

ENSAPLG00000016160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038937

124549062 - 124569787

20726

ENSAPLT00000038564

124557512 - 124569624

12113

ENSAPLT00000027642

124549062 - 124569624

20563

ENSAPLT00000016878

124551721 - 124569624

17904