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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124564125_124564848_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124564125 - 124564848

Intron Length:

724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CCTGATTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

CTTTCTCTAACG

Flanking Amino Acid:

SGKVVSLRCIQCGLSTKSTA

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

1.3

79.6

34.4

Major BPS

72.3

0.55

73.3

28.9

Major PPT

70.5

0.46

0.9

61.1

39.8

Minor 5ss

38.6

-1.3

3.3

51.8

38.6

Minor BPS

65.2

0.34

1.8

71.75

41.4

Associated Gene:

Gene:

TMPRSS2

Ensembl Gene ID:

ENSAPLG00000016160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038937

124549062 - 124569787

20726

ENSAPLT00000038564

124557512 - 124569624

12113

ENSAPLT00000027642

124549062 - 124569624

20563

ENSAPLT00000016878

124551721 - 124569624

17904