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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124566931_124568124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124566931 - 124568124

Intron Length:

1194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAGAC

U12 Branch Point Sequence:

CAGACTGTCACT

Flanking Amino Acid:

MKLETPLSFTDNVQPVCLPN

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.1

0.99

0.8

92.6

23.1

Major BPS

56.4

0.16

52.6

34.2

Major PPT

84.6

0.78

0.7

80.6

31.5

Minor 5ss

41.8

-0.9

2.9

57.3

41.2

Minor BPS

42.1

-0.5

2.3

56.94

45.9

Associated Gene:

Gene:

TMPRSS2

Ensembl Gene ID:

ENSAPLG00000016160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038564

124557512 - 124569624

12113

ENSAPLT00000027642

124549062 - 124569624

20563

ENSAPLT00000016878

124551721 - 124569624

17904

ENSAPLT00000038937

124549062 - 124569787

20726