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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124568221_124568774_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124568221 - 124568774

Intron Length:

554

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGTG

5'SS Class:

strong_major

3'SS Sequence:

GTTTCAATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

CATGTTTCAATT

Flanking Amino Acid:

ISGWGAESQGGKTSTNLNYV

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

78.9

35.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

74.9

0.56

0.9

71.7

38.3

Minor 5ss

-1.8

3.5

46.6

48.7

Minor BPS

49.5

0.04

1.6

64.08

41.3

Associated Gene:

Gene:

TMPRSS2

Ensembl Gene ID:

ENSAPLG00000016160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038564

124557512 - 124569624

12113

ENSAPLT00000027642

124549062 - 124569624

20563

ENSAPLT00000016878

124551721 - 124569624

17904

ENSAPLT00000038937

124549062 - 124569787

20726