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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124569604_124569775_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124569604 - 124569775

Intron Length:

172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TTGTTCTAAACA

Flanking Amino Acid:

FTDWIYKNMQANR*

Intron Amino Acid Position:

480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.8

22.9

Major BPS

74.5

0.61

79.6

29.1

Major PPT

73.7

0.53

70.6

39.1

Minor 5ss

39.6

-1.2

3.1

55.7

48.5

Minor BPS

69.5

0.61

1.6

78.47

38.6

Associated Gene:

Gene:

TMPRSS2

Ensembl Gene ID:

ENSAPLG00000016160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038937

124549062 - 124569787

20726