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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124572836_124574821_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124572836 - 124574821

Intron Length:

1986

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTTTA

5'SS Class:

major

3'SS Sequence:

TCCCTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

AATCTTGTAACT

Flanking Amino Acid:

MISHTKAYFTGASKRLSNQI

Intron Amino Acid Position:

645

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.1

73.5

33.2

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

82.1

0.72

0.7

76.3

25.7

Minor 5ss

41.2

-1

45.5

Minor BPS

0.14

72.42

38.5

Associated Gene:

Gene:

MX1

Ensembl Gene ID:

ENSAPLG00000015976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039235

124572503 - 124588790

16288

ENSAPLT00000016707

124572503 - 124588790

16288