Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_124581348_124581909_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124581348 - 124581909

Intron Length:

562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGATAT

5'SS Class:

strong_major

3'SS Sequence:

GGTAACTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTAAC

U12 Branch Point Sequence:

TGTACCTGACTA

Flanking Amino Acid:

EVDPKGERTLGILTKPDLVD

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

79.5

29.4

Major BPS

59.1

0.23

1.2

61.6

34.1

Major PPT

0.36

57.2

42.9

Minor 5ss

39.8

-1.1

3.2

53.2

Minor BPS

52.2

0.06

1.8

65.99

40.3

Associated Gene:

Gene:

MX1

Ensembl Gene ID:

ENSAPLG00000015976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016707

124572503 - 124588790

16288

ENSAPLT00000039235

124572503 - 124588790

16288