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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124585364_124586831_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

124585364 - 124586831

Intron Length:

1468

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

GGCATCACTGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

ATGGCATTACCT

Flanking Amino Acid:

LSGVSLPRGNGIVTRCPLEL

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

81.1

32.8

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

59.8

0.22

0.9

51.9

37.9

Minor 5ss

35.6

-1.6

3.1

50.4

45.6

Minor BPS

50.1

0.08

71.28

45.5

Associated Gene:

Gene:

MX1

Ensembl Gene ID:

ENSAPLG00000015976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039235

124572503 - 124588790

16288

ENSAPLT00000016707

124572503 - 124588790

16288