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Intron Name: Anas_platyrhynchos_platyrhynchos_1_124613295_124618711_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

124613295 - 124618711

Intron Length:

5417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCTGGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

ATATCTTTATAT

Flanking Amino Acid:

PSRIMWLNRQNIVKLSGLLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

35.1

Major BPS

79.2

0.73

75.3

39.4

Major PPT

0.74

0.9

80.9

31.1

Minor 5ss

32.3

-2

2.7

37.1

33.8

Minor BPS

60.6

0.41

1.7

76.63

39.6

Associated Gene:

Gene:

FAM3B

Ensembl Gene ID:

ENSAPLG00000015920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016612

124605572 - 124618946

13375